Introduction
AI for science is AI put to work on the science itself: reading the literature, analyzing lab data, designing molecules, running trials. My background is neuroscience. I left the field because I wanted to build “scalable systems that could connect dots in meaningful ways, especially between data, research, and translational impact or medicine.” AI is the tool that can best enable this.
This guide is for the PI, the startup scientist and the exec who know they need to be using the latest tools and don't have time to get up to speed on everything. It tells you what to use for what, and shows you someone who already did.
Erin Magennis
Medicine and the clinic
Most clinical AI news is a benchmark. Before you trust a model near patients or trial design, look at how it was tested and on what.
Try this first
whydidthistrialfail.ai
Enter a trial ID, sponsor or title and get a structured explanation of why the trial likely failed.
Enter a failed trial from your area and read the explanation it builds. Source on LinkedIn
Also in the toolbox
- Bedside Bench
Doximity's clinical AI benchmark: 500 questions written by physicians, across 10 parts of clinical care. Source
- AutoMedBench
Tests medical AI agents at every step (planning, setup, validation) as well as the final answer. 6,300+ runs, 7 tracks. Source
- MONAI Physio
An open-source toolkit that turns 3D and 4D medical images into heart and lung digital twins. Source
What happened lately
- ICON builds Claude into clinical trials
A large CRO plans to use it for site selection, enrollment forecasting and protocol design. Per a third-party post. Source
Biology and drug discovery
This is where most of the action is this year: design tools that hand designs to a wet lab and get data back, and models built for biology.
Try this first
bio.rodeo
Tracks 1,796 biological foundation models, with alerts by category and an MCP server.
Follow the model category you work on, so new models come to you. Source on LinkedIn
Also in the toolbox
- Codex with the Adaptyv plugin
Design peptides in Codex, then send them to Adaptyv's lab for testing. Source
- Rosalind Workbench
A workbench for biologists, built into Codex. Source
- Anthropic Life Sciences Verification Program
Verified labs and companies can apply for access to Anthropic's most capable models for biology and drug development work. Source
What happened lately
- Claude designs protein binders with up to 35% hit rates
With Adaptyv Bio and Twist Bioscience, binders for 14 of 15 targets. A human expert wrote the 30k-token prompt. Source
- Antibodies designed by an AI harness, then tested
Will Hua's opendde-harness designs antibodies from a plain request. The designs went to the lab. Source
- Claude finds an unknown enzyme system in phage DNA
It sits next to a CRISPR-like repeat array. Anthropic says what it does is not yet known. Source
How science gets done
Reading, checking, coding and reproducing. These are the tasks every lab has, and where a new tool can save the most hours this week.
Try this first
Evidence API
Searches 100M+ papers for the strongest evidence for and against a claim.
Paste a claim from your grant draft and read what argues against it. Source on X
Also in the toolbox
- Paper Scorecard
Finds the citing papers that actually engage with a paper and shows their critiques. Source
- Lazarus
An agent that gets dead research code running again, starting from a GitHub link. Source
- PaperBanana (Google)
Turns methodology text into figures for papers. Source
What happened lately
- A model finds one experiment run 1,400 times
Pointed at 40 years of ribosome methods sections, it flagged results only one lab had ever reported. Per a third-party post. Source
- Claude makes 30 open bio models 4x faster
Anthropic open sourced the optimization code. Cheaper runs on the models your team already uses. Source
- Ginkgo builds four autonomous labs at universities
At MIT, Caltech, Northwestern and Maryland. Source
Physical and earth sciences
A short chapter for now. Most of what we saved this year is biology. Weather and chemistry are where the useful tools are.
Try this first
WeatherNext 3
Google's global weather model, with hourly high-resolution forecasts anywhere on Earth through Weather Lab.
Pull the hourly forecast for a field site you work at. Source on X
Also in the toolbox
- MagNET on Rowan
An ML model that predicts 1H and 13C NMR shieldings, a drop-in for DFT in NMR workflows. Built with groups at Merck, MIT, Harvard and CSU. Source
Open science
Shared data and open infrastructure decide what your models can learn from. Some of it is growing fast, and some of it is going away.
Try this first
OpenAlex snapshot
The full OpenAlex record of scholarly work as one free download, with new machine-readable docs.
Download the snapshot once instead of scraping the website. Source on LinkedIn
Also in the toolbox
- The full arXiv corpus
All 3,148,796 arXiv papers, every version, 16 TB, as a Hugging Face dataset. Source
- Neuroscience dataset browser
Search 10,000+ open neuroscience datasets across EEG, MRI, MEG, NIRS, PET and more, from about 1,000 institutions. Source
What happened lately
AI safety in AI for science
The same tools that speed up a lab can be misused, leak data or game a test. It has its own page.